PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.74SLF
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 303aa    MW: 33303.6 Da    PI: 8.6383
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.74SLFgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.37.3e-052612803655
                  S-STCHHHHHHHHHHHHHHH CS
          HLH  36 kKlsKaeiLekAveYIksLq 55 
                  +  s a++L +Av+YIk Lq
  Araip.74SLF 261 RQTSTADMLDLAVDYIKGLQ 280
                  4499***************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000835.20E-4255284No hitNo description
SuperFamilySSF474593.79E-5260295IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.9E-4260296IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    Send to blast
MDSNNTNSGL LRTELEKLIS SNNKNKRVVN NSSEHLKREE GNNNCNYSFG SQNHVIYQNN  60
QHYHQIHQGL AMASSCNNGF DGTLFGATNS MDSENNNDNG TQNKMGSNLV RQKSSPAGFF  120
SNYSIDNNGT TTSSRSSSGL QCTLNFSSRS SSCSKSRMPK IVESGNEGME SNCCYMPRFT  180
GDFWDASEFN SSKRGTNNGE IMFSTSNAME AQVGLTHHLS LPSSSTKIGG MEKLFQIQGS  240
APCKIRAKRG FATHPRSIAE RQTSTADMLD LAVDYIKGLQ KQVKILTDTR AKCNCSSNNQ  300
KEQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015937350.10.0PREDICTED: transcription factor bHLH130-like
SwissprotQ66GR32e-33BH130_ARATH; Transcription factor bHLH130
TrEMBLA0A151TSC22e-95A0A151TSC2_CAJCA; Transcription factor bHLH130 family
STRINGGLYMA13G27455.19e-95(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40053359
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.16e-27bHLH family protein